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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11033686 chr11:36561978 A/G TAF10 chr11:6627526-6633898:- 0.58 6.18 1.66E-9 Box Plot
BLCA rs11033686 chr11:36561978 A/G TSSC4 chr11:2421718-2425108:+ 0.53 6.21 1.34E-9 Box Plot
BLCA rs11036881 chr11:42427992 A/C C11orf58 chr11:16634679-16778428:+ -0.66 -6.94 1.73E-11 Box Plot
BLCA rs11036881 chr11:42427992 A/C CAPRIN1 chr11:34073230-34122703:+ -0.56 -6.25 1.12E-9 Box Plot
BLCA rs11036881 chr11:42427992 A/C NAP1L4 chr11:2965661-3013607:- -0.73 -6.53 2.04E-10 Box Plot
BLCA rs11036881 chr11:42427992 A/C NAT10 chr11:34127149-34169217:+ -0.74 -6.7 7.3E-11 Box Plot
BLCA rs11036881 chr11:42427992 A/C PRMT3 chr11:20409076-20530840:+ -0.6 -6.22 1.28E-9 Box Plot
BLCA rs11036881 chr11:42427992 A/C PSMC3 chr11:47440320-47448024:- -0.49 -6.12 2.31E-9 Box Plot
BLCA rs11036881 chr11:42427992 A/C PTPMT1 chr11:47586982-47595013:+ -0.69 -6.55 1.89E-10 Box Plot
BLCA rs11036881 chr11:42427992 A/C SAAL1 chr11:18091482-18127638:- -0.67 -7.1 6.13E-12 Box Plot
BLCA rs11036881 chr11:42427992 A/C TRIM3 chr11:6469843-6495689:- -0.63 -6.42 4.03E-10 Box Plot
BLCA rs11036881 chr11:42427992 A/C TSG101 chr11:18489883-18548779:- -0.72 -6.37 5.32E-10 Box Plot
BLCA rs11036881 chr11:42427992 A/C USP47 chr11:11862970-11980870:+ -0.73 -6.48 2.82E-10 Box Plot
BLCA rs11038387 chr11:45316657 A/G AMBRA1 chr11:46417964-46615675:- -0.73 -6.35 6.05E-10 Box Plot
BLCA rs11057768 chr12:125196375 G/T ATP5EP2 chr13:28519343-28519727:+ 0.36 6.72 6.61E-11 Box Plot